Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921003.1_cds_XP_016470047.1_62537
CDS Infomation

[gene=LOC107792351] [db_xref=GeneID:107792351] [protein=uncharacterized protein LOC107792351 isoform X3] [protein_id=XP_016470047.1] [location=complement(join(10244..10423,10883..10947,11029..11219,11408..11747,13494..13607,13919..14035,14188..14323,14649..14746,15533..15767,16727..16824,17754..17828,19055..19313,23697..23786,24671..24718))] [gbkey=CDS]
Sequence

ATGGTTCTTCTCCAGGCTATCTCGATACAACAAAGTCTAGCACAGAAGGTATTGTACACC
ACACAAATAACTCAAAAGGCAAAGAAGTTCCATGATGGGTATTTGCGACTTGTGATGTTT
GGCTCACATGGCAAGCAGATCATGCTGTATGATGCAACCAGGAGACTCCTAGATAATAGG
TTTCTGAAAAAGGATGAAAGAATCATGTCTGGCCAATCGGTAACATTTGATGGTCACTTG
GTGGAGATAGGAGAATCTGAGGAAGATCAAAAGCCTCCAAAGGACATTAGACCTCAAGGA
AAGCATATCACAGACATTGAAACAAGAGAGCCAGTACACGGGGATGTCGGTGTCCATAAC
AAGTTTCCAGCTGGTTGTCTAAATAAAATTCAGTTAGAGTTCAAGAAGAGTGAAGTTCGC
AAATATAGTTCTTCACCGGGTTCCCTTGACATGACAAAATCAAGCACAGAAGAATGGCAG
GTACTGTACACCACACAAATAACTCAAAAAGCAAAGAAGTTCCATGATGGGATTTTGCGA
CTGGTGATGTCTGGCTCACATGGCAAGCAGATCATGCTGTATGATGCGACCAGGAGACTC
CTAGTTAGCAGGTTTCTGAAAAAGAATGAGAGCATCGGTTCTGGTGAATCGGTAACATTT
GATGGTTACTTGGTGGATATTGGAGAATGTGAGGGAGACCAAAAGCCTCTAAAGGATATT
AGTCCTCGAGAAAAGCATATCAAGGAACTTGGAAAAAGAGGACCGGTACAGGGGGAAGTT
GCTGTCCTCAATAAGTTGCTTGCTGAATGGGATGCCATGTATACAACTCAGATAACTCAG
AAAGCAAAAAAATACAATAATGGAATCCTTAGACTTTCATCCTTTGGTTCCCACCAATCT
CAGGTTACTCTACTTACAGAAGAAGGGAACATACTATGCCGAAAGTTCCTCAAGTTATCA
GAACATGTCACAACTGGAACTACATTGAATCTGTCAAATTATTTGGTTGAAGTTGGTGAC
ATGAGGACAAGTCCAGAAGGAAAACCTCAAACTGGTGCTTCTTCCCGAGAGCATGCACAA
TCTGATTTTAAAATATCTGGACTCGACCATATCAAATTAAGTAGGAGAATCTCCTCTGAC
AAGCCACTTCCTAATAGTGAACCTCAAAATGTAGCTTTTTCGGTGGAACATATGGACTCA
AAGACTGCAAGCTGTTCTGTTGACAAAACAATGAATTGTAGGATTTCCAGAACAAACTCT
GTTCGTGCAGCCCATGAAATCTTGTCCATTCTTAAAAAACCTATCACTTCGAAAGGCGCT
AGCACAGTAAGGGACATCACATTTGCAGAGGAATGCCAAGTATTGCAGTCATCAAGTCTT
GTTTGCAGTGACATTAAGAGTCAAACAGAGGAACATCTCTTGCAAGACTTCAATGTTAAA
GGTAGTTCACCACTGCATAGGGAAGAACAAACTACCATGACGCATAGCAGTGGCAGGAAC
ATTTCAGAAATAAAAGTTACTGATGCATCCCATTTGGATGACATTTCCCAGTCTTCGGAT
TGCACCGGCCAAAGAGTATCTCATACTCAGTCATTAAGCTTGTCTACAGTATTAGGAGAG
ATGGATATATGCTTGCGTGATGTAGAATGCATTGTCACAGAGAGGCCTCCAACTGCAAAG
CTGAAGCATTTGGTTATTCCTGAGTCAGACTATAAGATTCAAGCAGTTGAAACACTCTGC
CACGACAGGTCTAATAAAATTTCAGAAACTGAGGATGCATCTGAATCTGTCTCCCAGCAA
GATAATCCTAGTGGCTCAGTGGCTCCATTAACTGATGTCTGCACCTTGACTCATGCATCC
AACAAGCCTGCTGCAGATAATAAGCAGATGGATACTCAATGGCAAGAGGGATTTTCTGGT
GTCATCGCAGATGCTTCAAATGACTTCCTTCCACAGTTCCTTTGCCACTCAACTGAGATG
AATTCTGTGCATGATATCAGTACATACAAAATGGACGATTTACCTAGTTTTGATCTTGGA
TTTTAG

Peptide Sequence

PEP ID

XP_016470047.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107792351 isoform X3 [Nicotiana tabacum]
Sequence

MVLLQAISIQQSLAQKVLYTTQITQKAKKFHDGYLRLVMFGSHGKQIMLYDATRRLLDNR
FLKKDERIMSGQSVTFDGHLVEIGESEEDQKPPKDIRPQGKHITDIETREPVHGDVGVHN
KFPAGCLNKIQLEFKKSEVRKYSSSPGSLDMTKSSTEEWQVLYTTQITQKAKKFHDGILR
LVMSGSHGKQIMLYDATRRLLVSRFLKKNESIGSGESVTFDGYLVDIGECEGDQKPLKDI
SPREKHIKELGKRGPVQGEVAVLNKLLAEWDAMYTTQITQKAKKYNNGILRLSSFGSHQS
QVTLLTEEGNILCRKFLKLSEHVTTGTTLNLSNYLVEVGDMRTSPEGKPQTGASSREHAQ
SDFKISGLDHIKLSRRISSDKPLPNSEPQNVAFSVEHMDSKTASCSVDKTMNCRISRTNS
VRAAHEILSILKKPITSKGASTVRDITFAEECQVLQSSSLVCSDIKSQTEEHLLQDFNVK
GSSPLHREEQTTMTHSSGRNISEIKVTDASHLDDISQSSDCTGQRVSHTQSLSLSTVLGE
MDICLRDVECIVTERPPTAKLKHLVIPESDYKIQAVETLCHDRSNKISETEDASESVSQQ
DNPSGSVAPLTDVCTLTHASNKPAADNKQMDTQWQEGFSGVIADASNDFLPQFLCHSTEM
NSVHDISTYKMDDLPSFDLGF

Transcript Sequence

Gene sequence data has not been registered.